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8JBP

Crystal structure of triosephosphate isomerase from Leishmania orientalis at 1.45 angstroms resolution with an arsenic atom bound at Cys57

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSRRC BEAMLINE TPS 05A
Synchrotron siteNSRRC
BeamlineTPS 05A
Temperature [K]100
Detector technologyPIXEL
Collection date2022-12-10
DetectorDECTRIS EIGER2 X 9M
Wavelength(s)0.99987
Spacegroup nameP 1 2 1
Unit cell lengths39.700, 79.353, 83.114
Unit cell angles90.00, 101.24, 90.00
Refinement procedure
Resolution19.740 - 1.450
R-factor0.1636
Rwork0.162
R-free0.19047
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.011
RMSD bond angle1.789
Data reduction softwareDENZO
Data scaling softwareHKL-2000
Phasing softwarePHASER (2.8.3)
Refinement softwareREFMAC (5.8.0405)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]50.00050.0001.480
High resolution limit [Å]1.4503.9401.450
Rmerge0.2260.0631.316
Rmeas0.2470.0691.472
Rpim0.0990.0270.650
Number of reflections8790345184318
<I/σ(I)>6.45.3
Completeness [%]98.69996.6
Redundancy5.96.44.1
CC(1/2)0.9790.9960.517
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1MICROBATCH5.7291.1518% PEG 8000 in 0.2M calcium acetate hydrate and 0.1M sodium cacodylate trihydrate pH5.9

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PDB entries from 2024-10-09

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