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8JAC

Crystal structure of Mycobacterium tuberculosis LpqY in complex with trehalose analogue YB-16

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-02-11
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.978
Spacegroup nameP 21 21 21
Unit cell lengths57.748, 62.864, 143.906
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.340 - 2.100
Rwork0.203
R-free0.24000
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.004
RMSD bond angle0.610
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.16_3549: ???)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.150
High resolution limit [Å]2.0902.090
Rmerge0.151
Number of reflections313513067
<I/σ(I)>13.79
Completeness [%]99.8
Redundancy13
CC(1/2)0.9990.813
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP729350 mM Magnesium sulfate hydrate, 50 mM HEPES sodium pH 7.0 and 1.6 M Lithium sulfate monohydrate

246031

PDB entries from 2025-12-10

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