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8J5W

The crystal structure of TrkA(F589L) kinase in complex with N-(3-cyclopropyl-5-((4-methylpiperazin-1-yl)methyl)phenyl)-4^6-methyl-14-oxo-5-oxa-13-aza-1(3,6)-imidazo[1,2-b]pyridazina-4(1,3)-benzenacyclotetradecaphan-2-yne-4^5-carboxamide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCAMD BEAMLINE GCPCC
Synchrotron siteCAMD
BeamlineGCPCC
Temperature [K]100
Detector technologyCCD
Collection date2022-12-26
DetectorRAYONIX MX-300
Wavelength(s)0.978690
Spacegroup nameP 31 1 2
Unit cell lengths51.677, 51.677, 229.152
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution29.051 - 2.280
R-factor0.221738725573
Rwork0.217
R-free0.26599
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.766
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER
Refinement softwarePHENIX (1.9_1692+SVN)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.360
High resolution limit [Å]2.2802.280
Number of reflections1646516465
<I/σ(I)>7.5
Completeness [%]100.0
Redundancy19.3
CC(1/2)0.9720.516
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP2890.1M Na2HPO4/KH2PO4 (pH 6.2), 2M NaCl

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PDB entries from 2024-05-15

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