8IZJ
Crystal structure of Escherichia coli Adenine Phosphoribosyltransferase (APRT) in complex with AMP
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID23-2 |
Synchrotron site | ESRF |
Beamline | ID23-2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-09-16 |
Detector | DECTRIS PILATUS3 2M |
Wavelength(s) | 0.8731 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 41.752, 86.942, 48.664 |
Unit cell angles | 90.00, 110.48, 90.00 |
Refinement procedure
Resolution | 45.590 - 1.600 |
R-factor | 0.16625 |
Rwork | 0.165 |
R-free | 0.19208 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.725 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.590 | 1.630 |
High resolution limit [Å] | 1.600 | 1.600 |
Rmerge | 0.088 | 0.612 |
Rmeas | 0.097 | 0.675 |
Rpim | 0.041 | 0.281 |
Number of reflections | 42857 | 2114 |
<I/σ(I)> | 10.8 | |
Completeness [%] | 99.8 | 100 |
Redundancy | 5.7 | 5.6 |
CC(1/2) | 0.990 | 0.871 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8 | 297 | 100 MM TRIS-HCL PH 8.0, 20 % PEG 4000, 0.2 M MGCL2 |