8IYU
CfbA S11T variant with Ni(II) ions
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2023-01-25 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.49 |
Spacegroup name | P 41 |
Unit cell lengths | 67.180, 67.180, 84.110 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.500 - 2.100 |
R-factor | 0.1865 |
Rwork | 0.186 |
R-free | 0.20440 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.012 |
RMSD bond angle | 1.240 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | MOLREP |
Refinement software | PHENIX (1.18.2) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.200 |
High resolution limit [Å] | 2.100 | 10.000 | 2.100 |
Rmerge | 0.046 | 0.027 | 0.653 |
Rmeas | 0.049 | 0.030 | 0.700 |
Number of reflections | 21846 | 216 | 2804 |
<I/σ(I)> | 20.71 | ||
Completeness [%] | 100.0 | ||
Redundancy | 7.5 | ||
CC(1/2) | 1.000 | 0.999 | 0.852 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.8 | 293 | 0.3M Na-malonate, 0.1M Tris-HCl, 8% (w/v) Gamma-PGA |