Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8IXU

Rat Transcobalamin in Complex with Cobalamin

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSPRING-8 BEAMLINE BL26B1
Synchrotron siteSPring-8
BeamlineBL26B1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-01-25
DetectorDECTRIS EIGER X 4M
Wavelength(s)0.99
Spacegroup nameP 21 21 21
Unit cell lengths51.310, 54.530, 142.870
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.880 - 1.300
R-factor0.1605
Rwork0.160
R-free0.17140
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle0.896
Data reduction softwareXDS (JAN 10 2022)
Data scaling softwareXSCALE (JAN 10 2022)
Refinement softwarePHENIX (1.20-4459)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.29048.2901.330
High resolution limit [Å]1.3005.8001.300
Rmerge0.1070.0313.188
Rmeas0.1120.0323.324
Number of reflections9997912627225
<I/σ(I)>13.5857.750.74
Completeness [%]99.9
Redundancy13.2704567959
CC(1/2)1.0001.0000.277
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52930.2 M NaNO3,20% PEG 3350, 0.1 M Bis-Tris propane pH 7.5

224572

PDB entries from 2024-09-04

PDB statisticsPDBj update infoContact PDBjnumon