8IT4
Phosphoglycerate mutase 1 complexed with a covalent inhibitor
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2020-11-19 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.97915 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 45.859, 70.687, 167.532 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.030 - 2.400 |
R-factor | 0.1816 |
Rwork | 0.179 |
R-free | 0.23010 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 1.003 |
Data scaling software | HKL-3000 |
Refinement software | PHENIX ((1.19.2_4158: ???)) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.490 |
High resolution limit [Å] | 2.400 | 5.170 | 2.400 |
Rmerge | 0.287 | 0.132 | 0.685 |
Rmeas | 0.300 | 0.139 | 0.729 |
Rpim | 0.087 | 0.040 | 0.247 |
Total number of observations | 260646 | ||
Number of reflections | 23052 | 2489 | 2265 |
<I/σ(I)> | 2.9 | ||
Completeness [%] | 100.0 | 99.8 | 100 |
Redundancy | 11.3 | 12.1 | 8.3 |
CC(1/2) | 0.976 | 0.996 | 0.921 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | PEG3350, 100mM MES6.0 |