8IPK
The structure of human mitochondrial methyltransferase METTL15 with SAM
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-07-24 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 70.506, 70.506, 134.674 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 25.245 - 1.900 |
R-factor | 0.1842 |
Rwork | 0.182 |
R-free | 0.22070 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 0.784 |
Data reduction software | HKL-2000 |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (3.3.22) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.250 | 1.930 |
High resolution limit [Å] | 1.900 | 1.900 |
Rmerge | 0.126 | 1.003 |
Number of reflections | 31270 | 1647 |
<I/σ(I)> | 23.2 | 2.2 |
Completeness [%] | 99.9 | |
Redundancy | 15 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 289 | 42% PEG 600, 0.2 M imidazole malate, pH 5.5 |