8IK8
Structure of DNA binding domain of McrBC endonuclease bound to DNA: L68F mutant
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I04 |
Synchrotron site | Diamond |
Beamline | I04 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-10-20 |
Detector | DECTRIS PILATUS 6M-F |
Wavelength(s) | 0.9795 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 74.662, 36.123, 142.805 |
Unit cell angles | 90.00, 98.63, 90.00 |
Refinement procedure
Resolution | 47.060 - 1.800 |
R-factor | 0.1863 |
Rwork | 0.184 |
R-free | 0.22200 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 3sse |
RMSD bond length | 0.015 |
RMSD bond angle | 1.341 |
Data reduction software | XDS |
Data scaling software | SCALA |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 47.060 | 1.840 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.086 | 0.770 |
Number of reflections | 66256 | 1994 |
<I/σ(I)> | 8 | 1.3 |
Completeness [%] | 99.4 | 98.9 |
Redundancy | 3.9 | 3.4 |
CC(1/2) | 0.995 | 0.710 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5.5 | 291.15 | 0.1-0.2 M Bis-Tris pH 5.5 and 12-24% PEG 4000 |