Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8IJY

Synechococcus elongatus 6-4 photolyase with an 8-HDF as the antenna chromophore and a covalently linked FAD as the catalytic cofactor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-11-29
DetectorDECTRIS PILATUS3 6M
Wavelength(s)0.9798
Spacegroup nameC 2 2 21
Unit cell lengths105.116, 109.136, 95.217
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution75.710 - 2.380
R-factor0.15288
Rwork0.151
R-free0.18964
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.016
RMSD bond angle2.403
Data reduction softwareHKL-3000
Data scaling softwareHKL-3000
Phasing softwarePHASER (2.6.1)
Refinement softwareREFMAC (5.8.0135)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]75.71050.0002.440
High resolution limit [Å]2.3806.5102.400
Rmerge0.1480.1000.472
Rmeas0.1570.1060.501
Rpim0.0510.0360.164
Number of reflections2202111971085
<I/σ(I)>5.3
Completeness [%]99.999.799.9
Redundancy8.98.38.5
CC(1/2)0.9930.9900.944
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP8.529320% (w/v) PEG 8000 , 100 mM Tris base/ Hydrochloric acid pH 8.5, 200 mM magnesium chloride

224931

PDB entries from 2024-09-11

PDB statisticsPDBj update infoContact PDBjnumon