8IFS
SARS-CoV-2 3CL protease (3CLpro) in complex with compound 7
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-11-12 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.979 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 54.542, 82.106, 86.394 |
Unit cell angles | 90.00, 96.91, 90.00 |
Refinement procedure
Resolution | 27.000 - 2.460 |
R-factor | 0.2677 |
Rwork | 0.266 |
R-free | 0.29550 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.662 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.17.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 59.310 | 2.590 |
High resolution limit [Å] | 2.460 | 2.460 |
Rmerge | 0.101 | 0.634 |
Rmeas | 0.110 | 0.689 |
Rpim | 0.043 | 0.266 |
Total number of observations | 177163 | 26636 |
Number of reflections | 27141 | 4054 |
<I/σ(I)> | 9.4 | 2.5 |
Completeness [%] | 97.8 | |
Redundancy | 6.5 | 6.6 |
CC(1/2) | 0.998 | 0.952 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 100 mM MES, pH5.5-6.5, 10%-25% PEG6000, 3% DMSO |