8IAY
Crystal structure of canine distemper virus hemagglutinin
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE AR-NW12A |
Synchrotron site | Photon Factory |
Beamline | AR-NW12A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2009-06-16 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 1 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 86.156, 86.156, 302.936 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 34.666 - 3.027 |
R-factor | 0.2865 |
Rwork | 0.284 |
R-free | 0.33640 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.730 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | PHENIX ((1.16_3549:)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.160 |
High resolution limit [Å] | 3.000 | 3.000 |
Rmerge | 1.248 | |
Rmeas | 0.173 | |
Rpim | 0.069 | 0.492 |
Number of reflections | 23165 | 2276 |
<I/σ(I)> | 13.4 | 2.5 |
Completeness [%] | 99.6 | |
Redundancy | 6.1 | |
CC(1/2) | 0.761 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 8 | 293 | 20mM Tris-HCl pH 8.0, 100mM NaCl |