8IA6
Crystal structure of scFv antibody against Phospholipase A2 of Echis carinatus venom
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 11.2C |
Synchrotron site | ELETTRA |
Beamline | 11.2C |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-07-30 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.988 |
Spacegroup name | I 1 2 1 |
Unit cell lengths | 66.890, 53.880, 169.326 |
Unit cell angles | 90.00, 94.43, 90.00 |
Refinement procedure
Resolution | 29.230 - 2.750 |
R-factor | 0.234 |
Rwork | 0.232 |
R-free | 0.26400 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.003 |
RMSD bond angle | 0.614 |
Data reduction software | iMOSFLM |
Phasing software | PHASER |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 33.350 | 2.900 |
High resolution limit [Å] | 2.750 | 2.750 |
Number of reflections | 15296 | 1580 |
<I/σ(I)> | 4.7 | 2.1 |
Completeness [%] | 96.1 | 99.8 |
Redundancy | 3.7 | 3.7 |
CC(1/2) | 0.925 | 0.613 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 5 | 293 | 0.05 M Citric acid, 0.05 M Bis-Tris propane pH 5.0, 16% w/v Polyethylene glycol 3350 |