8I19
Crystal structure of human MTH1(G2K mutant) in complex with 8-oxo-dGTP at pH 8.0
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44XU |
Synchrotron site | SPring-8 |
Beamline | BL44XU |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2011-07-23 |
Detector | RAYONIX MX225HE |
Wavelength(s) | 0.9 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 45.498, 47.993, 123.489 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.630 - 1.480 |
R-factor | 0.1525 |
Rwork | 0.150 |
R-free | 0.19010 |
Structure solution method | FOURIER SYNTHESIS |
Starting model (for MR) | 5ghi |
RMSD bond length | 0.005 |
RMSD bond angle | 1.108 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.13_2998) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 36.630 | 1.510 |
High resolution limit [Å] | 1.480 | 1.480 |
Rmerge | 0.080 | 0.268 |
Number of reflections | 45875 | 2237 |
<I/σ(I)> | 39.8 | |
Completeness [%] | 99.4 | |
Redundancy | 7.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | sodium citrate, tris, NaCl |