8HZY
The crystal structure of a Radical SAM Enzyme DesII
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-03-07 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.9785 |
Spacegroup name | P 21 2 21 |
Unit cell lengths | 97.088, 105.190, 118.248 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 32.979 - 2.040 |
R-factor | 0.207433659102 |
Rwork | 0.205 |
R-free | 0.24425 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.771 |
Data reduction software | DIALS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.12_2829) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 32.980 | 2.080 |
High resolution limit [Å] | 2.030 | 2.040 |
Number of reflections | 77686 | 4562 |
<I/σ(I)> | 5.8 | |
Completeness [%] | 100.0 | |
Redundancy | 6.2 | |
CC(1/2) | 0.990 | 0.680 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293 | 0.1 M MES monohydrate pH 6.0, 20% PEG 6000 and 1.0 M LiCl |