8HVA
Crystal structure of EGFR_TMX in complex with covalently bound compound 14
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU MICROMAX-007 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2019-08-22 |
Detector | RIGAKU HyPix-6000HE |
Wavelength(s) | 1.540562 |
Spacegroup name | I 2 3 |
Unit cell lengths | 144.739, 144.739, 144.739 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 14.930 - 2.770 |
R-factor | 0.24282 |
Rwork | 0.242 |
R-free | 0.25135 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5edq |
RMSD bond length | 0.007 |
RMSD bond angle | 1.519 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0238) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 14.930 | 2.920 |
High resolution limit [Å] | 2.770 | 2.770 |
Rmerge | 0.246 | 2.621 |
Rmeas | 0.269 | 2.835 |
Rpim | 0.106 | 1.059 |
Total number of observations | 78307 | |
Number of reflections | 12847 | 1879 |
<I/σ(I)> | 7.8 | |
Completeness [%] | 99.0 | 99.8 |
Redundancy | 6.1 | 6.8 |
CC(1/2) | 0.989 | 0.433 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | 0.1M TRIS pH 8.5, 0.15M Sodium citrate, 25%PEG400 |