8HV1
Crystal structure of EGFR_DMX in complex with covalently bound fragment 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SOLEIL BEAMLINE PROXIMA 2 |
Synchrotron site | SOLEIL |
Beamline | PROXIMA 2 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2018-06-20 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.98 |
Spacegroup name | I 2 3 |
Unit cell lengths | 144.910, 144.910, 144.910 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 25.000 - 2.400 |
R-factor | 0.19067 |
Rwork | 0.189 |
R-free | 0.21884 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5edq |
RMSD bond length | 0.010 |
RMSD bond angle | 1.578 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | MOLREP |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.830 | 2.320 |
High resolution limit [Å] | 2.260 | 2.260 |
Rmerge | 0.061 | 1.556 |
Rmeas | 0.064 | 1.639 |
Rpim | 0.020 | 0.508 |
Total number of observations | 247239 | 17201 |
Number of reflections | 18909 | 1714 |
<I/σ(I)> | 23.2 | 1.4 |
Completeness [%] | 99.7 | |
Redundancy | 10.4 | 10 |
CC(1/2) | 1.000 | 0.516 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 292 | 0.1M TRIS pH 8.5, 0.15M Sodium citrate, 25%PEG400 |