8HHK
Crystal structure of a triple-helix region of human collagen type III
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-09-29 |
Detector | DECTRIS EIGER2 S 9M |
Wavelength(s) | 0.9792 |
Spacegroup name | P 1 |
Unit cell lengths | 15.335, 29.155, 69.047 |
Unit cell angles | 101.91, 91.58, 101.15 |
Refinement procedure
Resolution | 22.460 - 2.500 |
R-factor | 0.2537 |
Rwork | 0.251 |
R-free | 0.31380 |
Structure solution method | AB INITIO PHASING |
RMSD bond length | 0.010 |
RMSD bond angle | 1.487 |
Data reduction software | XDS |
Data scaling software | XDS |
Phasing software | MOLREP |
Refinement software | PHENIX (1.18.1_3865) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.560 |
High resolution limit [Å] | 2.500 | 2.500 |
Rmerge | 0.072 | 0.064 |
Rpim | 0.046 | 0.044 |
Number of reflections | 3808 | 3808 |
<I/σ(I)> | 15.93 | 15.24 |
Completeness [%] | 95.4 | 91.5 |
Redundancy | 3.4 | 3 |
CC(1/2) | 0.988 | 0.981 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.1 M HEPES sodium pH 7.5, 2% v/v Polyethylene glycol 400 2.0 M Ammonium sulfate |