8HBL
Crystal structure of the SARS-unique domain (SUD) of SARS-CoV-2 (1.58 angstrom resolution)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SLS BEAMLINE X10SA |
Synchrotron site | SLS |
Beamline | X10SA |
Temperature [K] | 277 |
Detector technology | PIXEL |
Collection date | 2022-09-12 |
Detector | DECTRIS EIGER2 S 16M |
Wavelength(s) | 0.9998 |
Spacegroup name | P 31 2 1 |
Unit cell lengths | 85.671, 85.671, 76.662 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 42.840 - 1.580 |
R-factor | 0.1408 |
Rwork | 0.139 |
R-free | 0.17960 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2w2g |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHENIX |
Refinement software | PHENIX (1.20_4459) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 42.840 | 10.000 | 1.680 |
High resolution limit [Å] | 1.580 | 4.730 | 1.580 |
Rmerge | 0.071 | 0.035 | 1.713 |
Rmeas | 0.075 | 0.036 | 1.000 |
Number of reflections | 44372 | 3177 | 13641 |
<I/σ(I)> | 21.99 | 20 | 1.23 |
Completeness [%] | 99.6 | 98.5 | 98.7 |
Redundancy | 19.787 | 10.449 | 10.46 |
CC(1/2) | 1.000 | 0.999 | 0.818 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 0.20 M Lithium sulfate monohydrate, 0.10 M Tris pH 8.50, 25% PEG3350 |