8HB2
Crystal structure of Caenorhabditis elegans NMAD-1 in complex with ligand II
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL02U1 |
Synchrotron site | SSRF |
Beamline | BL02U1 |
Temperature [K] | 293 |
Detector technology | PIXEL |
Collection date | 2022-09-13 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.9793 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 180.237, 75.386, 117.215 |
Unit cell angles | 90.00, 112.53, 90.00 |
Refinement procedure
Resolution | 30.190 - 3.060 |
R-factor | 0.2888 |
Rwork | 0.275 |
R-free | 0.29570 |
Structure solution method | AB INITIO PHASING |
RMSD bond length | 0.010 |
RMSD bond angle | 1.382 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | BALBES |
Refinement software | PHENIX ((1.18.2_3874: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.250 | 3.230 |
High resolution limit [Å] | 3.060 | 3.060 |
Rmerge | 0.098 | |
Number of reflections | 26508 | 26508 |
<I/σ(I)> | 10.5 | |
Completeness [%] | 95.7 | |
Redundancy | 4.4 | |
CC(1/2) | 0.997 | 0.997 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.6 | 289 | 25% PEG 4000, 100 mM MES pH 5.6 |