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8H7K

SARS-CoV-2 Mpro Double Mutant (H41A and T21I) in complex with nsp4/5 peptidyl substrate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL02U1
Synchrotron siteSSRF
BeamlineBL02U1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-09-23
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.978530
Spacegroup nameC 1 2 1
Unit cell lengths97.668, 80.884, 51.647
Unit cell angles90.00, 114.52, 90.00
Refinement procedure
Resolution19.940 - 1.450
R-factor0.1686
Rwork0.168
R-free0.18380
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7dvp
Data reduction softwareautoPROC
Data scaling softwareXSCALE
Phasing softwarePHENIX
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]19.94019.9401.540
High resolution limit [Å]1.4504.2601.450
Rmerge0.0340.0200.749
Rmeas0.0370.0220.813
Total number of observations431767
Number of reflections64519255910339
<I/σ(I)>24.0279.192.38
Completeness [%]99.797.899.7
Redundancy6.6926.5046.594
CC(1/2)1.0000.9990.904
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1EVAPORATION2930.2% w/v Lidocaine hydrochloride monohydrate, 0.2% w/v Procaine hydrochloride, 0.2% w/v Proparacaine hydrochloride, 0.2% w/v tetracaine hydrochloride, 0.1 M Buffer System 2 pH 7.5 (sodium HEPES, MOPS acid), 20% v/v Glycerol, 10% w/v PEG 4,000

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PDB entries from 2024-05-15

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