8H58
Crystal structure of YhaJ effector binding domain
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PAL/PLS BEAMLINE 7A (6B, 6C1) |
| Synchrotron site | PAL/PLS |
| Beamline | 7A (6B, 6C1) |
| Temperature [K] | 100 |
| Detector technology | CCD |
| Collection date | 2022-03-24 |
| Detector | ADSC QUANTUM 315 |
| Wavelength(s) | 0.97933 |
| Spacegroup name | H 3 |
| Unit cell lengths | 215.193, 215.193, 263.409 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 36.905 - 2.639 |
| Rwork | 0.177 |
| R-free | 0.23580 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | AF_AFP67660F1 |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.647 |
| Data reduction software | HKL-2000 (v715) |
| Data scaling software | HKL-2000 (v715) |
| Phasing software | PHASER (2.8.3) |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 36.910 | 2.740 |
| High resolution limit [Å] | 2.639 | 2.639 |
| Rmerge | 0.088 | 0.386 |
| Number of reflections | 131090 | 12621 |
| <I/σ(I)> | 10.9 | 2.6 |
| Completeness [%] | 98.2 | 94.5 |
| Redundancy | 4.1 | 2.8 |
| CC(1/2) | 0.995 | 0.352 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 7 | 291 | 2.8M sodium acetate trihydrate pH 7.0 |






