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8H41

Crystal structure of a decarboxylase from Trichosporon moniliiforme in complex with o-nitrophenol

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-10-20
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.0
Spacegroup nameP 21 21 21
Unit cell lengths57.916, 92.310, 128.660
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.930 - 1.780
R-factor0.1671
Rwork0.166
R-free0.19400
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6jqw
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]30.00030.0001.840
High resolution limit [Å]1.7803.8301.780
Rmerge0.0930.0380.596
Rmeas0.1020.0420.652
Rpim0.0410.0170.261
Total number of observations382838
Number of reflections6439568616204
<I/σ(I)>12.9
Completeness [%]96.197.393.9
Redundancy5.966
CC(1/2)0.9980.739
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.529525% w/v Poly(acrylic acid sodium salt) 5100, 0.02 M MgCl2, 0.1 M HEPES pH 7.5, 10% glycerol

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PDB entries from 2024-05-15

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