8H0L
Sulfur binding domain of Hga complexed with phosphorothioated DNA
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL18U1 |
Synchrotron site | SSRF |
Beamline | BL18U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-07-06 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.979150 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 39.865, 57.530, 177.362 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 24.130 - 1.800 |
R-factor | 0.1988 |
Rwork | 0.198 |
R-free | 0.22360 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7cc9 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19_4092) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 24.130 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.129 | 0.427 |
Number of reflections | 38501 | 3712 |
<I/σ(I)> | 17.1 | 2.75 |
Completeness [%] | 99.8 | |
Redundancy | 8 | |
CC(1/2) | 0.990 | 0.900 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 287 | 0.1M Potassium chloride, 0.05M Sodium Cacodylate trihydrate pH 6.0, 16% w/v Polyethylene glycol 1000, 0.0005M Spermine |