8GWD
Crystal structure of AtHPPD-Y18734 complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2021-08-10 |
Detector | ADSC QUANTUM 315r |
Wavelength(s) | 0.9878 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 76.754, 83.530, 61.542 |
Unit cell angles | 90.00, 100.59, 90.00 |
Refinement procedure
Resolution | 30.246 - 1.889 |
R-factor | 0.1881 |
Rwork | 0.186 |
R-free | 0.21820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 7e0x |
RMSD bond length | 0.007 |
RMSD bond angle | 0.812 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX ((1.13_2998: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.930 |
High resolution limit [Å] | 1.889 | 1.889 |
Rmerge | 0.128 | 0.354 |
Number of reflections | 29282 | 1374 |
<I/σ(I)> | 9.6 | |
Completeness [%] | 96.5 | |
Redundancy | 3.6 | |
CC(1/2) | 0.975 | 0.850 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 291 | 0.1M Tris/Bicine pH 8.5, 15% (v/v) MPD, 15% (w/v) PEG 1000, 15% (w/v) PEG 3350, 0.03M NaBr, 0.03M NaF, 0.03M NaI |