Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8GVB

The complex between public TCR TD08 and HLA-A24 bound to HIV-1 Nef138-8 peptide

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRF BEAMLINE BL19U1
Synchrotron siteSSRF
BeamlineBL19U1
Temperature [K]100
Detector technologyPIXEL
Collection date2020-07-27
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97915
Spacegroup nameP 32 2 1
Unit cell lengths71.657, 71.657, 381.651
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution35.010 - 3.200
R-factor0.2821
Rwork0.280
R-free0.32080
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)3vxm
RMSD bond length0.005
RMSD bond angle0.630
Refinement softwarePHENIX (1.18.2_3874)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.318
High resolution limit [Å]3.2003.200
Rmerge0.1472.172
Number of reflections1972219722
<I/σ(I)>19.0311.48
Completeness [%]99.4100
Redundancy14.8
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP2910.06 M divalent ions (MgCl2, CaCl2), 0.1 M Tris (pH 8.5), 0.1 M Bicine (pH 8.5)

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon