8GV5
Crystal structure of PN-SIA28 in complex with influenza hemagglutinin A/swine/Guangdong/104/2013 (H1N1)
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SSRF BEAMLINE BL19U1 |
Synchrotron site | SSRF |
Beamline | BL19U1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-09-07 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97774 |
Spacegroup name | P 63 |
Unit cell lengths | 85.797, 85.797, 231.289 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.630 - 3.200 |
R-factor | 0.2697 |
Rwork | 0.267 |
R-free | 0.30820 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 5gjs |
RMSD bond length | 0.005 |
RMSD bond angle | 0.966 |
Data reduction software | HKL-2000 |
Phasing software | PHASER |
Refinement software | PHENIX (1.20_4459) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.310 |
High resolution limit [Å] | 3.200 | 3.200 |
Rmerge | 0.190 | 2.400 |
Number of reflections | 15923 | 1571 |
<I/σ(I)> | 15.3 | 1 |
Completeness [%] | 73.2 | |
Redundancy | 12.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 291 | 0.1M magnesium acetate, 0.1M sodium acetate, 8% w/v PEG 8000 (pH 4.5) |