8GUL
Chitin-active AA10 LPMO (GbpA) complexed with Cu(II) from Vibrio campbellii
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSRRC BEAMLINE TPS 05A |
Synchrotron site | NSRRC |
Beamline | TPS 05A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2022-06-21 |
Detector | RAYONIX MX-300 |
Wavelength(s) | 0.99984 |
Spacegroup name | P 41 21 2 |
Unit cell lengths | 113.433, 113.433, 213.761 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.780 - 2.440 |
R-factor | 0.2063 |
Rwork | 0.204 |
R-free | 0.23970 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Alphafold2 |
RMSD bond length | 0.002 |
RMSD bond angle | 0.471 |
Data reduction software | XDS |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.480 |
High resolution limit [Å] | 2.440 | 2.440 |
Rmerge | 0.125 | 1.190 |
Rmeas | 0.127 | 1.310 |
Rpim | 0.024 | 0.518 |
Number of reflections | 52161 | 2166 |
<I/σ(I)> | 29.1 | 0.72 |
Completeness [%] | 99.0 | 84.1 |
Redundancy | 26.2 | |
CC(1/2) | 0.454 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 292.15 | 1.0M Ammonium sulfate, 0.1M ADA buffer, pH 7.0 |