8GU3
Crystal structure of Caenorhabditis elegans METT-10 methyltransferase domain
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | PHOTON FACTORY BEAMLINE BL-1A |
Synchrotron site | Photon Factory |
Beamline | BL-1A |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-12-02 |
Detector | DECTRIS EIGER X 4M |
Wavelength(s) | 1.0 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 43.210, 70.080, 94.230 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 47.120 - 3.010 |
R-factor | 0.2438 |
Rwork | 0.241 |
R-free | 0.29750 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 6b91 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.18.2_3874) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 47.120 | 47.120 | 3.080 |
High resolution limit [Å] | 3.010 | 13.440 | 3.010 |
Rmerge | 0.113 | 0.034 | 1.341 |
Rmeas | 0.117 | 0.036 | 1.398 |
Total number of observations | 76348 | ||
Number of reflections | 6086 | 82 | 448 |
<I/σ(I)> | 17.92 | 44.17 | 1.59 |
Completeness [%] | 99.9 | 96.5 | 99.1 |
Redundancy | 12.545 | 8.939 | 12.377 |
CC(1/2) | 0.999 | 0.999 | 0.691 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.5 | 293 | ammonium acetate, Tris-HCl pH8.5, PEG 3350 |