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8GSY

X-ray structure of Clostridium perfringens pili protein B N-terminal domain

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-5A
Synchrotron sitePhoton Factory
BeamlineBL-5A
Temperature [K]100
Detector technologyPIXEL
Collection date2022-03-22
DetectorDECTRIS PILATUS3 6M
Wavelength(s)1.0
Spacegroup nameP 32 2 1
Unit cell lengths39.080, 39.080, 290.590
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution48.480 - 1.550
R-factor0.1868
Rwork0.184
R-free0.23963
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)8gsx
RMSD bond length0.008
RMSD bond angle1.502
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwareMOLREP
Refinement softwareREFMAC (5.8.0267)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]48.4801.590
High resolution limit [Å]1.5501.550
Number of reflections391682809
<I/σ(I)>23.23
Completeness [%]100.0
Redundancy9.4
CC(1/2)0.9990.789
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION29350 mM bis-tris pH 6.5, 50 mM ammonium sulfate, 30% v/v pentaerythritol ethoxylate (15/4 EO/OH)

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