8GSY
X-ray structure of Clostridium perfringens pili protein B N-terminal domain
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | PHOTON FACTORY BEAMLINE BL-5A |
| Synchrotron site | Photon Factory |
| Beamline | BL-5A |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2022-03-22 |
| Detector | DECTRIS PILATUS3 6M |
| Wavelength(s) | 1.0 |
| Spacegroup name | P 32 2 1 |
| Unit cell lengths | 39.080, 39.080, 290.590 |
| Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
| Resolution | 48.480 - 1.550 |
| R-factor | 0.1868 |
| Rwork | 0.184 |
| R-free | 0.23963 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | 8gsx |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.502 |
| Data reduction software | XDS |
| Data scaling software | XSCALE |
| Phasing software | MOLREP |
| Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 48.480 | 1.590 |
| High resolution limit [Å] | 1.550 | 1.550 |
| Number of reflections | 39168 | 2809 |
| <I/σ(I)> | 23.23 | |
| Completeness [%] | 100.0 | |
| Redundancy | 9.4 | |
| CC(1/2) | 0.999 | 0.789 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION | 293 | 50 mM bis-tris pH 6.5, 50 mM ammonium sulfate, 30% v/v pentaerythritol ethoxylate (15/4 EO/OH) |






