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8GM3

Vibrio harveyi Holo HphA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 24-ID-C
Synchrotron siteAPS
Beamline24-ID-C
Temperature [K]100
Detector technologyPIXEL
Collection date2018-08-03
DetectorDECTRIS PILATUS 6M-F
Wavelength(s)0.9791
Spacegroup nameP 2 21 21
Unit cell lengths39.438, 81.080, 135.577
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution69.586 - 1.727
R-factor0.2116
Rwork0.210
R-free0.25500
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle0.827
Data reduction softwareXDS
Data scaling softwareSCALEPACK
Refinement softwarePHENIX (1.13-2998-000)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]69.5861.789
High resolution limit [Å]1.7271.727
Number of reflections463084480
<I/σ(I)>10.071.41
Completeness [%]92.077.61
Redundancy22
CC(1/2)0.9920.732
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP293The initial crystals of PUF1 were observed from a screen condition containing 25% PEG3350, 0.1 M Bis-Tris pH 5.5 with trypsin added to 3.53 mg/mL PUF1 at a 1:100 mass ratio. Further optimization was performed to obtain better crystals that formed in 25% PEG3350, 0.1M Bis-Tris pH 5.0, and 20% glycerol with streak seeding, trypsin at 0.06 mg/mL and PUF1 at 6.64mg/mL

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