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8GFP

Crystal structure of soluble lytic transglycosylase Cj0843 of Campylobacter jejuni in complex with N-acetyl-2,3-dehydro-2-deoxyneuraminic acid inhibitor

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-1
Synchrotron siteNSLS-II
Beamline17-ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-11-03
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.9201
Spacegroup nameI 2 3
Unit cell lengths178.822, 178.822, 178.822
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution126.450 - 2.070
R-factor0.1794
Rwork0.177
R-free0.22060
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)6cf9
RMSD bond length0.009
RMSD bond angle1.665
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0349)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]126.4502.110
High resolution limit [Å]2.0702.070
Rmerge0.1332.685
Number of reflections574632840
<I/σ(I)>14.61.2
Completeness [%]100.0100
Redundancy20.919.3
CC(1/2)0.9990.539
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.92930.1 M sodium citrate pH 5.9 and 26% (v/v) PEG 600. Protein buffer was 10 mM HEPES pH 8.0, 200 mM ammonium acetate buffer

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