8GBX
Crystal structure of PC39-50I, an anti-HIV broadly neutralizing antibody
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2015-10-17 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.03320 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 91.621, 131.101, 104.553 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 45.810 - 2.700 |
R-factor | 0.2138 |
Rwork | 0.212 |
R-free | 0.24350 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.002 |
RMSD bond angle | 0.561 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.19.2_4158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.750 |
High resolution limit [Å] | 2.700 | 2.700 |
Rpim | 0.100 | 0.830 |
Number of reflections | 17633 | 801 |
<I/σ(I)> | 7.4 | 1 |
Completeness [%] | 99.8 | 97.6 |
Redundancy | 6.9 | 4 |
CC(1/2) | 0.870 | 0.360 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6 | 293.15 | 10% glycerol, 0.1 M MES, 5% PEG 1000, 30% PEG 600 |