8GBU
Hepatitis B capsid Y132A mutant with compound AB-506
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | CLSI BEAMLINE 08ID-1 |
Synchrotron site | CLSI |
Beamline | 08ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-06-30 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.978950 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 151.936, 87.879, 100.827 |
Unit cell angles | 90.00, 104.12, 90.00 |
Refinement procedure
Resolution | 97.780 - 2.500 |
R-factor | 0.235 |
Rwork | 0.233 |
R-free | 0.28500 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.011 |
RMSD bond angle | 1.497 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 97.780 | 11.180 | 2.560 |
High resolution limit [Å] | 2.500 | 7.910 | 2.500 |
Rmerge | 0.062 | 0.029 | 0.263 |
Rmeas | 0.072 | 0.034 | 0.306 |
Number of reflections | 44273 | 905 | 3226 |
<I/σ(I)> | 12.78 | ||
Completeness [%] | 99.0 | ||
Redundancy | 3.77 | ||
CC(1/2) | 0.998 | 0.999 | 0.984 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 289 | 100 mM ammonium citrate/citric acid pH 6.5, 9%(vol/vol) isopropanol, 10%(wt/vol) PEG 3350, 10% (vol/vol) 2-Methyl-2,4-pentanediol, 0.6:0.3ul at a 2:1 volume ratio at 16C. |