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8G68

Wildtype PTP1b in complex with DES5742

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsDIAMOND BEAMLINE I03
Synchrotron siteDiamond
BeamlineI03
Temperature [K]100
Detector technologyPIXEL
Collection date2017-02-10
DetectorDECTRIS PILATUS 6M
Wavelength(s)0.97625
Spacegroup nameP 43 21 2
Unit cell lengths87.990, 87.990, 162.170
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution77.340 - 1.820
R-factor0.20579
Rwork0.203
R-free0.25441
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)in-house structure of same protein
RMSD bond length0.019
RMSD bond angle1.864
Data reduction softwarexia2
Data scaling softwareAimless
Phasing softwarePHASER
Refinement softwareREFMAC (5.8.0158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]77.3401.860
High resolution limit [Å]1.8201.820
Rmerge0.1261.972
Rpim0.0380.615
Number of reflections577753383
<I/σ(I)>11.81.4
Completeness [%]99.899.1
Redundancy11.710.7
CC(1/2)0.9980.521
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION6.2278Reservoir solution: 50 mM MES (pH 6.2), 14% PEG6000, 50 mM MgCl2; Protein solution: 10.3 mg/ml PTP-1B 1-298 in 25 mM Hepes pH 7.2, 150 mM NaCl, 1 mM EDTA, 2 mM DTT

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PDB entries from 2024-05-15

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