8G68
Wildtype PTP1b in complex with DES5742
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | DIAMOND BEAMLINE I03 |
Synchrotron site | Diamond |
Beamline | I03 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2017-02-10 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97625 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 87.990, 87.990, 162.170 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 77.340 - 1.820 |
R-factor | 0.20579 |
Rwork | 0.203 |
R-free | 0.25441 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | in-house structure of same protein |
RMSD bond length | 0.019 |
RMSD bond angle | 1.864 |
Data reduction software | xia2 |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0158) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 77.340 | 1.860 |
High resolution limit [Å] | 1.820 | 1.820 |
Rmerge | 0.126 | 1.972 |
Rpim | 0.038 | 0.615 |
Number of reflections | 57775 | 3383 |
<I/σ(I)> | 11.8 | 1.4 |
Completeness [%] | 99.8 | 99.1 |
Redundancy | 11.7 | 10.7 |
CC(1/2) | 0.998 | 0.521 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION | 6.2 | 278 | Reservoir solution: 50 mM MES (pH 6.2), 14% PEG6000, 50 mM MgCl2; Protein solution: 10.3 mg/ml PTP-1B 1-298 in 25 mM Hepes pH 7.2, 150 mM NaCl, 1 mM EDTA, 2 mM DTT |