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8FRA

Mouse acidic mammalian chitinase, catalytic domain in complex with diacetylchitobiose at pH 5.60

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]100
Detector technologyPIXEL
Collection date2021-06-15
DetectorDECTRIS PILATUS 6M
Wavelength(s)1.11578
Spacegroup nameP 21 21 21
Unit cell lengths92.066, 106.705, 146.570
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution86.270 - 1.950
R-factor0.1711
Rwork0.169
R-free0.20580
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.003
RMSD bond angle0.660
Data reduction softwarexia2 (0.3.8.0)
Data scaling softwareDIALS (2.2.10-g6dafd9427-release)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]86.2702.020
High resolution limit [Å]1.9501.950
Rmerge0.1620.628
Rmeas0.1760.682
Rpim0.0680.265
Number of reflections6777510401
<I/σ(I)>5.651.26
Completeness [%]99.799.62
Redundancy6.56.6
CC(1/2)0.9970.845
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.6293.1511 mg/mL AMCase catalytic domain 20% w/v PEG 6000 0.1 M Sodium Acetate pH 5.60 0.2 M Magnesium Chloride 19.33 mM GlcNAc2

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PDB entries from 2024-05-15

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