8FIW
Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor Jun10221
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-11-11 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 45.160, 53.355, 114.462 |
Unit cell angles | 90.00, 100.67, 90.00 |
Refinement procedure
Resolution | 48.250 - 2.540 |
R-factor | 0.22029 |
Rwork | 0.218 |
R-free | 0.26267 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.006 |
RMSD bond angle | 1.430 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.590 |
High resolution limit [Å] | 2.550 | 6.920 | 2.550 |
Rmerge | 0.962 | 0.067 | 0.640 |
Total number of observations | 69933 | ||
Number of reflections | 32064 | 1675 | 1608 |
<I/σ(I)> | 6.7 | ||
Completeness [%] | 92.8 | 96.5 | 94 |
Redundancy | 2.2 | 2.2 | 2 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 25% PEG 3350, 0.2 M AmSO4, 0.1 M HEPES 7.5 |