8FIV
Crystal structure of the SARS-CoV-2 (COVID-19) main protease in complex with inhibitor Jun10541R
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-11-11 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 113.293, 54.038, 45.448 |
Unit cell angles | 90.00, 101.29, 90.00 |
Refinement procedure
Resolution | 48.640 - 2.510 |
R-factor | 0.21354 |
Rwork | 0.210 |
R-free | 0.27707 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 1.441 |
Data reduction software | HKL-3000 |
Data scaling software | HKL-3000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.540 |
High resolution limit [Å] | 2.500 | 6.780 | 2.500 |
Rmerge | 0.931 | 0.122 | 0.941 |
Total number of observations | 31046 | ||
Number of reflections | 16687 | 870 | 713 |
<I/σ(I)> | 7.7 | ||
Completeness [%] | 92.4 | 95.3 | 81.6 |
Redundancy | 1.9 | 2 | 1.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 25 % 3350, 0.2 M AmSO4, 0.1 M HEPES 7.5 |