8FFX
Crystal structure of HIV-1 reverse transcriptase in complex with non-nucleoside inhibitor 19980
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 23-ID-D |
Synchrotron site | APS |
Beamline | 23-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-03-14 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.033 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 161.952, 73.377, 107.966 |
Unit cell angles | 90.00, 100.05, 90.00 |
Refinement procedure
Resolution | 48.290 - 2.420 |
R-factor | 0.2159 |
Rwork | 0.214 |
R-free | 0.26560 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.005 |
RMSD bond angle | 0.694 |
Data reduction software | autoXDS |
Data scaling software | pointless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 48.290 | 2.507 |
High resolution limit [Å] | 2.420 | 2.420 |
Rmerge | 0.088 | |
Rmeas | 0.124 | |
Rpim | 0.088 | |
Number of reflections | 47666 | 4692 |
<I/σ(I)> | 9.75 | 1.62 |
Completeness [%] | 99.0 | 95.54 |
Redundancy | 2 | 2 |
CC(1/2) | 0.425 | 0.288 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 277 | 10%(v/v) PEG 8000, 4%(v/v) PEG 400, 100 mM imidazole pH 6.6, 10 mM spermine, 15 mM MgSO4, 100 mM ammonium sulfate, and 5 mM tris(2-carboxyethyl)phosphine |