8FER
16mer self-complementary duplex RNA with two continuous s(2)U:s(2)U pairs
This is a non-PDB format compatible entry.
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 2.0.1 |
Synchrotron site | ALS |
Beamline | 2.0.1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-09-14 |
Detector | DECTRIS PILATUS3 6M |
Wavelength(s) | 1.037690 |
Spacegroup name | H 3 2 |
Unit cell lengths | 43.810, 43.810, 258.170 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 43.065 - 1.540 |
Rwork | 0.219 |
R-free | 0.25870 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.017 |
RMSD bond angle | 2.757 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHASER |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 1.570 |
High resolution limit [Å] | 1.540 | 1.540 |
Rmerge | 0.113 | 0.429 |
Rmeas | 0.121 | 0.461 |
Rpim | 0.043 | 0.166 |
Number of reflections | 14744 | 747 |
<I/σ(I)> | 13.7 | 4.4 |
Completeness [%] | 99.7 | 100 |
Redundancy | 7.9 | 7.6 |
CC(1/2) | 0.986 | 0.978 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7.5 | 293 | 0.02 M Magnesium chloride hexahydrate, 0.002 M Cobalt(II) chloride hexahydrate, 0.05 M HEPES sodium pH 7.5, 2.0 M Ammonium sulfate, 0.001 M Spermine |