8FDD
Crystal structure of Ky15.3 Fab in complex with circumsporozoite protein NPDP peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 17-ID-1 |
Synchrotron site | NSLS-II |
Beamline | 17-ID-1 |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2020-09-01 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 0.920088 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 38.452, 83.301, 66.364 |
Unit cell angles | 90.00, 99.70, 90.00 |
Refinement procedure
Resolution | 37.900 - 1.540 |
R-factor | 0.1762 |
Rwork | 0.175 |
R-free | 0.20350 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.008 |
RMSD bond angle | 0.953 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 40.000 | 1.560 |
High resolution limit [Å] | 1.540 | 1.540 |
Number of reflections | 60897 | 2259 |
<I/σ(I)> | 12.2 | |
Completeness [%] | 100.0 | |
Redundancy | 7 | |
CC(1/2) | 0.998 | 0.656 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 293.15 | 0.1 M CHES pH 9.5, 30% PEG3000 |