8FAQ
Structure of Hemagglutinin from Influenza A/Victoria/22/2020
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 21-ID-D |
Synchrotron site | APS |
Beamline | 21-ID-D |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2021-12-03 |
Detector | DECTRIS EIGER X 9M |
Wavelength(s) | 1.12723 |
Spacegroup name | H 3 2 |
Unit cell lengths | 99.705, 99.705, 395.310 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 79.252 - 2.035 |
Rwork | 0.203 |
R-free | 0.22910 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2yp4 |
RMSD bond length | 0.007 |
RMSD bond angle | 1.473 |
Data reduction software | autoPROC |
Data scaling software | XDS |
Phasing software | PHENIX |
Refinement software | REFMAC (5.8.0267) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 79.252 | 2.071 |
High resolution limit [Å] | 2.035 | 2.035 |
Rmerge | 0.077 | 1.642 |
Rmeas | 0.079 | |
Number of reflections | 48446 | 2360 |
<I/σ(I)> | 21.6 | 2.2 |
Completeness [%] | 98.6 | 98 |
Redundancy | 20.4 | |
CC(1/2) | 0.999 | 0.865 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5.5 | 291.15 | 50% PEG-200, 0.1M citrate pH 5.5, final pH 6.9 |