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8F8X

Crystal structure of Nb.X0 bound to the afucosylated human IgG1 fragment crystal form II

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 17-ID-1
Synchrotron siteNSLS-II
Beamline17-ID-1
Temperature [K]100
Detector technologyPIXEL
Collection date2022-09-19
DetectorDECTRIS EIGER X 9M
Wavelength(s)0.92010
Spacegroup nameC 1 2 1
Unit cell lengths125.577, 92.233, 76.497
Unit cell angles90.00, 117.04, 90.00
Refinement procedure
Resolution46.120 - 2.600
R-factor0.2214
Rwork0.215
R-free0.28530
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.015
RMSD bond angle1.790
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwarePHENIX
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.640
High resolution limit [Å]2.6002.600
Rpim0.0500.574
Number of reflections213521051
<I/σ(I)>23.6
Completeness [%]90.7
Redundancy2.5
CC(1/2)0.9960.504
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP29320 % w/v PEG 6000, 0.1 M Sodium citrate 4.0, 0.2 M Lithium chloride. No additional cryoprotectant.

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