Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8F8U

Bifunctional ligase/repressor BirA from Klebsiella pneumoniae (Domain Swapped Dimer)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS-II BEAMLINE 19-ID
Synchrotron siteNSLS-II
Beamline19-ID
Temperature [K]100
Detector technologyPIXEL
Collection date2022-10-30
DetectorDECTRIS EIGER2 XE 9M
Wavelength(s)0.97949
Spacegroup nameP 21 21 2
Unit cell lengths99.910, 155.740, 58.750
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution29.740 - 2.850
R-factor0.2167
Rwork0.215
R-free0.25520
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle0.788
Data reduction softwareXDS
Data scaling softwareXSCALE
Phasing softwarePHASER
Refinement softwarePHENIX (1.20.1_4487)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]84.0932.980
High resolution limit [Å]2.8502.850
Rmerge0.0621.709
Number of reflections202351012
<I/σ(I)>17.11
Completeness [%]94.249.3
Redundancy6.76.4
CC(1/2)1.0000.427
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.5291Morpheus G3: 20%(v/v) Glycerol, 10% w/v PEG 4000, 100 mM Imidazole/MES, pH 6.5, 20 mM Sodium formate, 20 mM Ammonium acetate, 20 mM Sodium citrate tribasic, 20 mM Potassium sodium tartrate and 20 mM Sodium oxamate, KlpnC.17896.a.B1.PW39036 at 30 mg/mL. Tray: Clover-Liu-S-045 / B1 , Puck: CPS5110_06, Cryo: 150% Morpheus G3. Protein crystals were dehydrated in this solution for 3 days before freezing.

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon