8F84
Crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor MAM787
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS-II BEAMLINE 19-ID |
Synchrotron site | NSLS-II |
Beamline | 19-ID |
Temperature [K] | 291 |
Detector technology | PIXEL |
Collection date | 2022-10-30 |
Detector | DECTRIS EIGER2 XE 9M |
Wavelength(s) | 0.97949 |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 28.698, 66.374, 44.146 |
Unit cell angles | 90.00, 91.44, 90.00 |
Refinement procedure
Resolution | 23.780 - 1.100 |
R-factor | 0.1263 |
Rwork | 0.125 |
R-free | 0.14400 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.007 |
RMSD bond angle | 1.053 |
Data reduction software | XDS |
Data scaling software | Aimless |
Phasing software | PHASER |
Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 44.130 | 1.120 |
High resolution limit [Å] | 1.100 | 1.100 |
Rmerge | 0.024 | 0.236 |
Rmeas | 0.026 | 0.269 |
Rpim | 0.010 | 0.125 |
Total number of observations | 433825 | 10791 |
Number of reflections | 65812 | 2486 |
<I/σ(I)> | 30.2 | 5.2 |
Completeness [%] | 98.3 | |
Redundancy | 6.6 | 4.3 |
CC(1/2) | 1.000 | 0.954 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | Morpheus F4: 12.5% PDB 1000, 12.5% PEG 3350, 12.5% MPD 0.02M of each monosaccharide (d-glucose, d-mannose, d-galactose, l-fucose, d-xylose, N-acetyld-glucosamine), 0.1M MES/imidazole pH 6.5 , MyulA.01062.a.B13.PS38558 at 10 mg/mL. Tray: Tray 355D3/ MAM738 +NADP, Puck: CPS5110_06, Cryo: Direct |