8F80
Crystal Structure of Dihydrofolate reductase (DHFR) from Mycobacterium ulcerans Agy99 in complex with NADP and inhibitor MAM738
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | NSLS-II BEAMLINE 19-ID |
| Synchrotron site | NSLS-II |
| Beamline | 19-ID |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2022-10-30 |
| Detector | DECTRIS EIGER2 XE 9M |
| Wavelength(s) | 0.97949 |
| Spacegroup name | P 1 21 1 |
| Unit cell lengths | 29.394, 70.749, 36.216 |
| Unit cell angles | 90.00, 111.44, 90.00 |
Refinement procedure
| Resolution | 21.640 - 1.100 |
| R-factor | 0.1184 |
| Rwork | 0.118 |
| R-free | 0.13280 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.142 |
| Data reduction software | XDS |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX (1.20.1_4487) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 70.750 | 1.130 |
| High resolution limit [Å] | 1.100 | 1.100 |
| Rmerge | 0.032 | 0.213 |
| Rmeas | 0.034 | 0.242 |
| Rpim | 0.013 | 0.112 |
| Total number of observations | 355439 | 14673 |
| Number of reflections | 53850 | 3300 |
| <I/σ(I)> | 25.7 | 5.8 |
| Completeness [%] | 96.6 | |
| Redundancy | 6.6 | 4.4 |
| CC(1/2) | 1.000 | 0.958 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 6.5 | 291 | Morpheus D3: 20%(v/v) Glycerol, 10% w/v PEG 4000, 100 mM Imidazole/MES, pH 6.5, 20 mM 1,6-Hexanediol, 20 mM 1-Butanol, 20 mM 1,2-Propanediol, 20 mM 2-Propanol, 20 mM 1,4-Butanediol and 20 mM 1,3-Propanediol, MyulA.01062.a.B13.PS38558 at 10 mg/mL. Tray: Tray 355D3/ MAM738 +NADP, Puck: CPS5110_06, Cryo: Direct |






