8F7Z
VRC34.01_mm28 bound to fusion peptide
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-02-10 |
Detector | DECTRIS EIGER X 16M |
Wavelength(s) | 1.000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 129.850, 130.554, 130.589 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 36.220 - 2.700 |
R-factor | 0.2116 |
Rwork | 0.210 |
R-free | 0.24280 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Alphafold model |
RMSD bond length | 0.006 |
RMSD bond angle | 0.973 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | PHENIX |
Refinement software | PHENIX ((1.20.1_4487: ???)) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.750 |
High resolution limit [Å] | 2.700 | 2.700 |
Rmerge | 0.134 | 0.581 |
Rmeas | 0.146 | 0.629 |
Rpim | 0.057 | 0.238 |
Number of reflections | 60434 | 3015 |
<I/σ(I)> | 16 | 2.6 |
Completeness [%] | 97.8 | |
Redundancy | 6.5 | |
CC(1/2) | 0.991 | 0.844 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 10% PEG 3350, 1.4M Na/K Phosphate pH 7.5 |