Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

8F4K

RT XFEL structure of the three-flash state of Photosystem II (3F, S0-rich) at 2.16 Angstrom resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeFREE ELECTRON LASER
Source detailsSLAC LCLS BEAMLINE MFX
Synchrotron siteSLAC LCLS
BeamlineMFX
Temperature [K]298
Detector technologyCCD
Collection date2018-11-27
DetectorRAYONIX MX340-HS
Wavelength(s)1.300
Spacegroup nameP 21 21 21
Unit cell lengths116.991, 221.755, 307.964
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution33.520 - 2.160
R-factor0.1856
Rwork0.185
R-free0.24100
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)7rf1
RMSD bond length0.009
RMSD bond angle1.144
Data reduction softwarecctbx.xfel
Data scaling softwarecctbx.xfel.merge
Phasing softwarePHASER
Refinement softwarePHENIX (1.19.2_4158)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]33.5202.190
High resolution limit [Å]2.1602.160
Number of reflections42519921097
<I/σ(I)>3.150.39
Completeness [%]99.9
Redundancy58.99.3
CC(1/2)0.9900.050
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1BATCH MODE6.52980.1 M MES pH 6.5, 0.1 M NH4Cl, 35% (w/v) PEG 5000

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon