8ETQ
Designed pentafoil knot protein folded into a trefoil knot
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-ID |
Synchrotron site | APS |
Beamline | 19-ID |
Temperature [K] | 100 |
Detector technology | PIXEL |
Collection date | 2022-07-27 |
Detector | DECTRIS PILATUS 6M |
Wavelength(s) | 0.97918 |
Spacegroup name | P 43 21 2 |
Unit cell lengths | 59.589, 59.589, 178.211 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 44.550 - 2.420 |
R-factor | 0.2076 |
Rwork | 0.202 |
R-free | 0.25450 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | computational design |
Data reduction software | HKL-2000 (0.9) |
Data scaling software | HKL-2000 (0.9) |
Phasing software | PHASER (2.8.3) |
Refinement software | PHENIX (1.18) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 50.000 | 50.000 | 2.460 |
High resolution limit [Å] | 2.420 | 6.560 | 2.420 |
Rmerge | 0.146 | 0.111 | 0.534 |
Rmeas | 0.150 | 0.114 | 0.559 |
Rpim | 0.031 | 0.025 | 0.158 |
Number of reflections | 22324 | 770 | 647 |
<I/σ(I)> | 10.1 | ||
Completeness [%] | 99.9 | 99.9 | 99.8 |
Redundancy | 21.2 | 21.6 | 10.4 |
CC(1/2) | 0.994 | 0.921 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | 0.2 M NaCl, 0.1 M Imidazole pH 8.0, 0.15 M Sodium phosphate monobasic, 1.35 M Potassium phosphate dibasic |