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8ERI

HTLV-1 capsid protein full-length

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAUSTRALIAN SYNCHROTRON BEAMLINE MX2
Synchrotron siteAustralian Synchrotron
BeamlineMX2
Temperature [K]100
Detector technologyPIXEL
Collection date2022-07-15
DetectorDECTRIS EIGER2 S 16M
Wavelength(s)0.9537
Spacegroup nameF 2 2 2
Unit cell lengths74.079, 128.663, 297.340
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution43.630 - 2.250
R-factor0.2528
Rwork0.251
R-free0.28780
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Alphafold2 prediction
Data reduction softwareXDS
Data scaling softwareAimless (0.7.8)
Phasing softwarePHASER (2.8.3)
Refinement softwarePHENIX (1.20.1)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]48.64048.6402.320
High resolution limit [Å]2.2509.0002.250
Rmerge0.1420.0791.222
Rmeas0.1480.0831.271
Rpim0.0400.0220.346
Total number of observations454329737936962
Number of reflections337455932877
<I/σ(I)>8.525.21.2
Completeness [%]99.499.193.2
Redundancy13.512.412.8
CC(1/2)0.9980.9970.823
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP62930.1M Na citrate, pH 6.0 8% 2-propanol 23% PEG3350

219869

PDB entries from 2024-05-15

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